bioplex2 {OmnipathR} | R Documentation |
This dataset contains ~56,000 interactions detected in HEK293T cells using 5,891 baits. More details at https://bioplex.hms.harvard.edu/interactions.php
bioplex2()
Data frame (tibble) with interactions.
bioplex_interactions <- bioplex2() nrow(bioplex_interactions) # [1] 56553 colnames(bioplex_interactions) # [1] "GeneA" "GeneB" "UniprotA" "UniprotB" # [5] "SymbolA" "SymbolB" "p_wrong" "p_no_interaction" # [9] "p_interaction"