get_interaction_resources {OmnipathR}R Documentation

Retrieve a list of interaction resources available in Omnipath

Description

Gets the names of the resources from https://omnipath.org/interactions.

Usage

get_interaction_resources(dataset = NULL)

Arguments

dataset

a dataset within the interactions query type. Currently available datasets are 'omnipath', 'kinaseextra', 'pathwayextra', 'ligrecextra', 'dorothea', 'tf_target', 'tf_mirna', 'mirnatarget' and 'lncrna_mrna'

Value

character vector with the names of the interaction databases

See Also

Examples

get_interaction_resources()


[Package OmnipathR version 3.0.0 Index]