experiment.colors {ORFik} | R Documentation |
Pick the grouping wanted for colors, by default only group by libtype. Like RNA-seq(skyblue4) and Ribo-seq(orange).
experiment.colors( df, color_list = "default", skip.libtype = FALSE, skip.stage = TRUE, skip.replicate = TRUE, skip.fraction = TRUE, skip.condition = TRUE )
df |
an ORFik |
color_list |
a character vector of colors, default "default". That is the vector c("skyblue4", 'orange', "green", "red", "gray", "yellow", "blue", "red2", "orange3"). Picks number of colors needed to make groupings have unique color |
skip.libtype |
a logical (FALSE), if TRUE don't include libtype |
skip.stage |
a logical (FALSE), if TRUE don't include stage in variable name. |
skip.replicate |
a logical (FALSE), if TRUE don't include replicate in variable name. |
skip.fraction |
a logical (FALSE), if TRUE don't include fraction |
skip.condition |
a logical (FALSE), if TRUE don't include condition in variable name. |
a character vector of colors