lodAssess,RccSet-method {NanoStringQCPro} | R Documentation |
Assess how many genes in each sample in an RccSet object are below the limit of detection. (The current implementation does a straightforward column sum on the presence/absence matrix (paData) in assayData.)
## S4 method for signature 'RccSet' lodAssess(rccSet)
rccSet |
An RccSet object |
A numeric vector giving the number of missing genes (endogenous and housekeeping genes) for each sample in an RccSet. If paData is not found in the input's assayData, NULL is returned.
Dorothee Nickles