plotRatiosDisp {NBSplice} | R Documentation |
plotRatiosDisp
returns a ggplot object with the scatter plot of
isoform's relative expression in the contrasted conditions. Isoforms are
colored according to the differential splicing status of the gene where they
come from.
plotRatiosDisp(myNBRes, adjusted = TRUE, p.value = 0.05) ## S4 method for signature 'NBSpliceRes' plotRatiosDisp(myNBRes, adjusted = TRUE, p.value = 0.05)
myNBRes |
NBSpliceRes class object. |
adjusted |
Logical indicating if adjusted p values should be used. |
p.value |
Numeric value between 0 and 1 giving the required family-wise error rate or false discovery rate. |
A ggplot object.
see full example in NBSpliceRes-class
Gabriela A. Merino merino.gabriela33@gmail.com and Elmer A. Fernandez efernandez@bdmg.com.ar
Other NBSpliceRes: GetDSGenes
,
GetDSResults
, GetGeneResults
,
NBSpliceRes-class
,
NBSpliceRes-initialize
,
NBSpliceRes
, myDSResults
,
plotGeneResults
, plotVolcano
data(myDSResults, package="NBSplice") g<-plotRatiosDisp(myDSResults) if(interactive()){ g }