check_info_score {MungeSumstats} | R Documentation |
Ensure all SNPs have info score above threshold
check_info_score(sumstats_dt, path, INFO_filter)
sumstats_dt |
data table obj of the summary statistics file for the GWAS |
path |
Filepath for the summary statistics file to be formatted |
INFO_filter |
integer The minimum value permissible of the imputation information score (if present in sumstatsfile). Default 0.9 |
list containing sumstats_dt, the modified summary statistics data table object