check_no_rs_snp {MungeSumstats}R Documentation

Ensure that SNP starts with rs

Description

Ensure that SNP starts with rs

Usage

check_no_rs_snp(sumstats_dt, path, ref_genome)

Arguments

sumstats_dt

data table obj of the summary statistics file for the GWAS

path

Filepath for the summary statistics file to be formatted

ref_genome

name of the reference genome used for the GWAS (GRCh37 or GRCh38)

Value

list containing sumstats_dt, the modified summary statistics data table object


[Package MungeSumstats version 1.0.1 Index]