collapse_deg {MetaVolcanoR} | R Documentation |
This function to remove redundant geneIDs standing for the same gene name
collapse_deg(diffexp, genenamecol, pcriteria)
diffexp |
data.frame/data.table output of the deg.def() function |
genenamecol |
the column name of the gene name variable <string> |
pcriteria |
the column name of the pvalue criteria to consider <string> |
data.table
differential expression results with unique gene
names
data(diffexplist) diffexp <- collapse_deg(diffexplist[[1]], "Symbol", "pvalue") head(diffexp, 3)