plotHeatmap {MetaNeighbor} | R Documentation |
Plots symmetric AUROC heatmap, clustering cell types by similarity.
plotHeatmap(aurocs, cex = 1, margins = c(8, 8), ...)
aurocs |
A square AUROC matrix as returned by MetaNeighborUS. |
cex |
Size factor for row and column labels. |
margins |
Size of margins (for row and column labels). |
... |
Additional graphical parameters that are passed on to gplots::heatmap.2 (allows customization of the heatmap). |
data(mn_data) var_genes = variableGenes(dat = mn_data, exp_labels = mn_data$study_id) celltype_NV = MetaNeighborUS(var_genes = var_genes, dat = mn_data, study_id = mn_data$study_id, cell_type = mn_data$cell_type) plotHeatmap(celltype_NV)