raw.input {MSstatsPTM}R Documentation

Example of input PTM dataset for LabelFree/DDA/DIA experiments.

Description

It can be the output of MSstatsPTM converter ProgenesistoMSstatsPTMFormat or other MSstats converter functions (Please see MSstatsPTM_LabelFree_Workflow vignette). The dataset is formatted as a list with two data.tables named PTM and PROTEIN. In each data.table the variables are as follows:

Usage

raw.input

Format

A list of two data.tables named PTM and PROTEIN with 1745 and 478 rows respectively.

Details

#'

Examples

head(raw.input$PTM)
head(raw.input$PROTEIN)


[Package MSstatsPTM version 1.2.4 Index]