PlotiRTScore {MQmetrics} | R Documentation |
Score vs retention time of the iRT peptides
PlotiRTScore(MQCombined, tolerance = 0.001)
MQCombined |
Object list containing all the files from the MaxQuant
output. It is the result from using |
tolerance |
Error maximum to find the iRT peptides by m/z value. by default is 0.001. |
A plot for each sample showing a linear regression of the iRT peptides' retention time vs the score.
MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics") MQCombined <- make_MQCombined(MQPathCombined) PlotiRT(MQCombined)