mbcb.gui {MBCB} | R Documentation |
This file provides the Graphical-User-Interface for the MBCB package.
mbcb.gui()
This GUI will allow you to easily input data files and a negative-control file and will output a log2-transformed background-corrected file.
The input files should be tab-delimited files in the following form:
signal.txt
g.1 g.2 g.3 g.4 10181072_239_rc-S 160.3 776.4 135.8 407.7 10181072_290-S 138.1 219.8 122.1 142.4 ... ... ... ... ...
neg-con.txt
id g.1 g.2 g.3 g.4 50133 127 213.5 82 103 50315 232 295 143.5 156 ... ... ... ... ...
Note that both of these examples come from a test involving four trials. Your data could use whatever number you'd like.
Yang Xie Yang.Xie@UTSouthwestern.edu, Min Chen min.chen@phd.mccombs.utexas.edu, Jeff Allen Jeffrey.Allen@UTSouthwestern.edu
data(MBCBExpressionData) #create files from the data provided in this package in the current directory write.table(expressionSignal, 'signal.txt', sep="\t"); write.table(negativeControl, 'negative.control.txt', sep="\t"); #open the GUI; you can use the files just created as input for the signal and # negative control files. mbcb.gui();