outlier_filter {ISAnalytics} | R Documentation |
Filter out outliers in metadata.
outlier_filter( metadata, outlier_test = "outliers_by_pool_fragments", negate = FALSE, ... )
metadata |
The metadata data frame |
outlier_test |
A string representing a function name. The name must be one of the available outlier tests, see available_outlier_tests. |
negate |
If TRUE will return only the metadata that was flagged to be removed. If FALSE will return only the metadata that wasn't flagged to be removed. |
... |
Additional named arguments passed to |
A data frame of metadata which has less or the same amount of rows
op <- options(ISAnalytics.widgets = FALSE) path_AF <- system.file("extdata", "ex_association_file.tsv", package = "ISAnalytics" ) association_file <- import_association_file(path_AF, root = NULL, dates_format = "dmy" ) filtered_af <- outlier_filter(association_file, key = "VCN") options(op)