CreateIRISFGMObject {IRISFGM}R Documentation

CreateIRISFGMObject

Description

Create IRIS-FGM object

Arguments

x

Input expression matrix which should be a matrix or dataframe.

min.cell

each gene should be expressed by at least this many cell.

min.gene

each cell should express this many gene at least.

LTMGr

Automatically create LTMG object.

Bicluster

Automatically create Bicluster object.

Details

CreateIRISFGMObject

Value

it should return a IRISFGM object of which structure can be found in tutorial.

Examples

x <- matrix(rnorm(100),ncol = 10) 
colnames(x) <- paste0("cell",1:ncol(x))
rownames(x) <- paste0("gene",1:nrow(x))
object <- CreateIRISFGMObject(x)

[Package IRISFGM version 1.0.0 Index]