plotReadCategoryQuals {IONiseR} | R Documentation |
Generates a box plot showing the mean base quality for each read, broken down into the three categories of read type that can be found in a fast5 file.
plotReadCategoryQuals(summaryData)
summaryData |
Object of class Fast5Summary. |
Returns an object of class gg
representing the plot.
if( require(minionSummaryData) ) { data(s.typhi.rep2, package = 'minionSummaryData') plotReadCategoryQuals( s.typhi.rep2 ) }