preprocess_homogeneous {HIPPO}R Documentation

Preprocess UMI data with inferred or known labels

Description

Preprocess UMI data with inferred or known labels

Usage

preprocess_homogeneous(sce, label)

Arguments

sce

SingleCellExperiment object with counts data

label

a numeric or character vector of inferred or known label

Value

data frame with one row for each gene.

Examples

data(toydata)
labels = SingleCellExperiment::colData(toydata)$phenoid
df = preprocess_homogeneous(toydata, label = labels)

[Package HIPPO version 1.4.0 Index]