searchExpressionLevels {GA4GHclient} | R Documentation |
This function gets expression levels matching the search criteria.
searchExpressionLevels(host, rnaQuantificationId, nrows = Inf, responseSize = NA_integer_)
host |
URL of GA4GH API data server. |
rnaQuantificationId |
Id of the rnaQuantification to restrict search to. |
nrows |
Number of rows of the data frame returned by this function. If not defined, the function will return all entries. If the number of available entries is less than the value of this this parameter, the function will silently return only the available entries. |
responseSize |
Specifies the number of entries to be returned by the
server until reach the number of rows defined in |
This function requests to /expressionlevels/search
.
DataFrame
object. NULL
means no registry found.
DataFrame
, getExpressionLevel
,
searchRnaQuantificationSets
host <- "http://1kgenomes.ga4gh.org/" ## Not run: datasetId <- searchDatasets(host, nrows = 1)$id rnaQuantificationSetId <- searchRnaQuantificationSets(host, datasetId, nrow = 1)$id rnaQuantificationId <- searchRnaQuantifications(host, rnaQuantificationSetId, nrows = 1)$id searchExpressionLevels(host, rnaQuantificationId, nrows = 10) ## End(Not run)