GR100 {FunChIP}R Documentation

Peaks of a ChIP-seq experiment

Description

The data-set GR100 contains 100 enriched regions on chromosome 18 of the transcription factor c-Myc on murine cells, obtained by calling peaks with MACS [Zhang et al., 2008] on a ChIP-Seq experiment. The genomic coordinates of the peaks are stored in the GRanges object GR100.

Usage

data("GR100")

Format

GRanges object with 100 ranges and 0 metadata columns.

References

Zhang et al., 2008. Model-based Analysis of ChIP-Seq (MACS). Genome Biology, vol. 9 (9) pp. R137.

Examples

data(GR100)
GR

[Package FunChIP version 1.18.0 Index]