subsetAssayNames {ExperimentSubset} | R Documentation |
Retrieves the names of all the subsets as well as the subset assays.
subsetAssayNames(x) ## S4 method for signature 'SubsetRangedSummarizedExperiment' subsetAssayNames(x) ## S4 method for signature 'SubsetSingleCellExperiment' subsetAssayNames(x) ## S4 method for signature 'SubsetSummarizedExperiment' subsetAssayNames(x) ## S4 method for signature 'SubsetSpatialExperiment' subsetAssayNames(x) ## S4 method for signature 'SubsetTreeSummarizedExperiment' subsetAssayNames(x)
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A vector
containing the names of the subsets and the subset
assays available in the input ExperimentSubset
object.
data(sce_chcl, package = "scds") es <- ExperimentSubset(sce_chcl) es <- createSubset(es, "subset1", rows = c(10,11,50,56,98,99,102,105,109, 200), cols = c(20,21,40,45,90,99,100,123,166,299), parentAssay = "counts") assay(es, "subset1", subsetAssayName = "subset1pAssay") <- assay(es, "subset1")[,] + 1 subsetAssayNames(es)