EventDetection {EventPointer}R Documentation

Detect splicing events using EventPointer methodology

Description

Identification of all the alternative splicing events in the splicing graphs

Usage

EventDetection(Input, cores, Path)

Arguments

Input

Output of the PrepareBam_EP function

cores

Number of cores used for parallel processing

Path

Directory where to write the EventsFound_RNASeq.txt file

Value

list with all the events found for all the genes present in the experiment. It also generates a file called EventsFound_RNASeq.txt with the information of each event.

Examples

  # Run EventDetection function
   data(SG_RNASeq)
   TxtPath<-tempdir()
   AllEvents_RNASeq<-EventDetection(SG_RNASeq,cores=1,Path=TxtPath)


[Package EventPointer version 3.0.0 Index]