plot_coverage_BigWig {ChromSCape}R Documentation

Coverage plot using Sushi

Description

Coverage plot using Sushi

Usage

plot_coverage_BigWig(
  coverages,
  label_color_list,
  peaks = NULL,
  chrom,
  start,
  end,
  ref = "hg38"
)

Arguments

coverages

A list containing sample coverage as GenomicRanges

label_color_list

List of colors, list names are labels

peaks

A GRanges object containing peaks location to plot (optional)

chrom

Chromosome

start

Start

end

End

ref

Genomic Reference

Value

A coverage plot annotated with genes

Examples

data(scExp)
plot_intra_correlation_scExp(scExp)


[Package ChromSCape version 1.2.62 Index]