FSRDistplot {ChIPexoQual} | R Documentation |
FSRDistplot
returns a ggplot
object with the Forward
Strand Ratio distribution plot to analyze strand imbalance in
ChIP-exo data.
FSRDistplot(..., names.input = NULL, quantiles = c(0, 0.25, 0.5, 0.75, 1), depth.values = seq_len(30), both.strand = FALSE)
... |
a |
names.input |
a character vector with the names to use in the
plot. If it is empty |
quantiles |
a numeric vector with the quantiles used to estimate the
FSR distribution at a given depth. The default value is
|
depth.values |
a numeric vector indicating the regions with depth
less or equal to, that are going to be filtered out. The defaulta values
are |
both.strand |
a logical value indicating if the |
A ggplot2
object with the FSR distribution plot.
data(exoExample) FSRDistplot(exoExample)