buildAIBSARNA {BrainSABER}R Documentation

Function to create a SummarizedExperiment containing BrainSpan Data

Description

This function is used to build the AIBSARNA SummarizedExperiment object, and must be run prior to running any other function in BrainSABER. This function will download the data from http://brainspan.org and may take several minutes, depending on internet connection speeds.

Usage

buildAIBSARNA(mini = FALSE)

Arguments

mini

Default is FALSE. If mini=TRUE, build a miniature version of AIBSARNA that does not require internet connectivity and is suitable for example purposes only

Value

A SummarizedExperiment containing BrainSpan data, with the addition of RefSeq IDs via biomaRt

Examples

AIBSARNA <- buildAIBSARNA(mini = TRUE)

[Package BrainSABER version 1.2.0 Index]