compareMethods {AneuFinder} | R Documentation |
Compare two sets of aneuHMM
objects generated by different methods (see option method
of findCNVs
).
compareMethods(models1, models2)
models1 |
A list of |
models2 |
A list of |
A data.frame with one column 'concordance' which gives the fraction of the genome that is called concordantly between both models.
Aaron Taudt
## Get a list of HMMs folder <- system.file("extdata", "primary-lung", "hmms", package="AneuFinderData") files <- list.files(folder, full.names=TRUE) ## Compare the models with themselves (non-sensical) df <- compareMethods(files, files) head(df)