getDirichletReplicate {ALDEx2} | R Documentation |
Returns the raw per-sample Monte Carlo Dirichlet
replicates generated from analysis, for an aldex.clr
object.
getDirichletReplicate(.object,i)
.object |
A |
i |
The numeric index of the desired sample replicate. |
Returns the raw per-sample Monte Carlo Dirichlet replicates. These are estimated probabilities.
A numeric matrix.
aldex.clr
data(selex) #subset for efficiency selex <- selex[1201:1600,] conds <- c(rep("NS", 7), rep("S", 7)) x <- aldex.clr(selex, conds, mc.samples = 2, denom = "all", verbose = FALSE) DirichletReplicate <- getDirichletReplicate(x,1)