This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see chipseqDBData.
Bioconductor version: 3.12
Sorted and indexed BAM files for ChIP-seq libraries, for use in the chipseqDB workflow. BAM indices are also included.
Author: Aaron Lun [aut, cre]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>
Citation (from within R,
enter citation("chipseqDBData")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("chipseqDBData")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("chipseqDBData")
HTML | R Script | File manifest and statistics |
Reference Manual | ||
Text | NEWS |
biocViews | ChIPSeqData, ExperimentData, ExperimentHub, SequencingData |
Version | 1.6.0 |
License | CC BY 4.0 |
Depends | |
Imports | AnnotationHub, ExperimentHub, Rsamtools, S4Vectors |
LinkingTo | |
Suggests | knitr, BiocStyle |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | chipseqDB, csawUsersGuide |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | chipseqDBData_1.6.0.tar.gz |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/chipseqDBData |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/chipseqDBData |
Package Short Url | https://bioconductor.org/packages/chipseqDBData/ |
Package Downloads Report | Download Stats |
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