geneplast.data

DOI: 10.18129/B9.bioc.geneplast.data    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see geneplast.data.

Input data for the geneplast package via AnnotationHub

Bioconductor version: 3.12

The package geneplast.data provides an interface for obtaining input data used in the analyses pipelines from geneplast package. Objects containing species, phylogenetic trees, and orthology information of eukaryotes from different orthologous databases are provided.

Author: Leonardo Campos [aut, cre], Danilo Imparato [aut], Rodrigo Dalmolin [aut], Mauro Castro [aut]

Maintainer: Leonardo Campos <leofields at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneplast.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneplast.data")

 

HTML	R Script	Supporting data for geneplast evolutionary analyses
PDF		Reference Manual
Text		NEWS

Details

biocViews	AnnotationData, AnnotationHub
Version	0.99.2
License	Artistic-2.0
Depends	R (>= 4.0)
Imports
LinkingTo
Suggests	knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	geneplast.data_0.99.2.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url	https://bioconductor.org/packages/geneplast.data/
Package Downloads Report	Download Stats