This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowFitExampleData.
Bioconductor version: 3.12
This package estimate the proliferation of a cell population in cell-tracking dye studies. The package uses an R implementation of the Levenberg-Marquardt algorithm (minpack.lm) to fit a set of peaks (corresponding to different generations of cells) over the proliferation-tracking dye distribution in a FACS experiment.
Author: Davide Rambaldi
Maintainer: Davide Rambaldi <davide.rambaldi at gmail.com>
Citation (from within R,
enter citation("flowFit")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("flowFit")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Software |
Version | 1.28.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (7.5 years) |
License | Artistic-2.0 |
Depends | R (>= 2.12.2) |
Imports | flowCore, flowViz, graphics, kza, methods, minpack.lm, gplots |
LinkingTo | |
Suggests | flowFitExampleData |
SystemRequirements | |
Enhances | |
URL | |
BugReports | Davide Rambaldi |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/flowFit |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowFit |
Package Short Url | https://bioconductor.org/packages/flowFit/ |
Package Downloads Report | Download Stats |
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