exportHighConfSub {wavClusteR} | R Documentation |
Export high-confidence substitutions as BED track, compatible with the UCSC genome browser
exportHighConfSub(highConfSub, filename = 'highConfSub.bed', trackname = 'highConfSub', description = 'highConfSub')
highConfSub |
GRanges object containing high-confidence substitution sites as returned by the getHighConfSub function |
filename |
A character defining the BED file name. Default to "wavClusters.bed" |
trackname |
A character defining the track.name of the BED file. Default to "wavClusters" |
description |
A character defining the description of the BED file. Default to "wavClusters" |
A BED file of the exported GRanges object
Substitutions are color coded according to their strand information (red for the plus strand, blue for the minus strand).
Federico Comoglio