DE {transcriptogramer} | R Documentation |
Gets the content of the DE slot of an object of class Transcriptogram.
DE(object) ## S4 method for signature 'Transcriptogram' DE(object)
object |
An object of class Transcriptogram. |
This method returns the content of the DE slot of an object of class Transcriptogram.
Diego Morais
Hs900, association, transcriptogramPreprocess
transcriptogram <- transcriptogramPreprocess(association, Hs900, 50) ## Not run: transcriptogram <- transcriptogramStep1(transcriptogram, GSE9988, GPL570) transcriptogram <- transcriptogramStep2(transcriptogram) levels <- c(rep(FALSE, 3), rep(TRUE, 3)) transcriptogram <- differentiallyExpressed(transcriptogram, levels, 0.01) DE(transcriptogram) ## End(Not run)