pivot_sample {tidybulk} | R Documentation |
pivot_sample() takes as input a 'tbl' formatted as | <SAMPLE> | <ENSEMBL_ID> | <COUNT> | <...> | and returns a 'tbl' with only sample-related columns
pivot_sample(.data, .sample = NULL) ## S4 method for signature 'spec_tbl_df' pivot_sample(.data, .sample = NULL) ## S4 method for signature 'tbl_df' pivot_sample(.data, .sample = NULL) ## S4 method for signature 'tidybulk' pivot_sample(.data, .sample = NULL)
.data |
A 'tbl' formatted as | <SAMPLE> | <TRANSCRIPT> | <COUNT> | <...> | |
.sample |
The name of the sample column |
This functon extracts only sample-related information for downstream analysis (e.g., visualisation). It is disruptive in the sense that it cannot be passed anymore to tidybulk function.
A 'tbl' object
A 'tbl' object
A 'tbl' object
A 'tbl' object
pivot_sample( tidybulk::counts_mini, .sample = sample )