real_transcripts {target} | R Documentation |
The differential expression analysis output of LNCaP cell line treated with DHT for 16 hours compared to non-treated cells. The REFSEQ transcript identifiers were used to merge the data.frame with the transcript coordinates from the hg19 reference genome.
real_transcripts
A GRanges
https://github.com/suwangbio/BETA/blob/master/BETA_test_data/AR_diff_expr.xls
https://github.com/suwangbio/BETA/blob/master/BETA_1.0.7/BETA/references/hg19.refseq
# load data data('real_transcripts') # locate the raw data system.file('extdata', 'AR_diff_expr.tsv.gz', package = 'target') system.file('extdata', 'hg19.refseq', package = 'target') # locate the source code for preparing the data system.file('extdata', 'make-data.R', package = 'target')