feature_profile {structToolbox} | R Documentation |
A plot visualising the change in intensity of a feature with a continuous variable such as time, dose, or run order.
feature_profile( run_order, qc_label, qc_column, colour_by, feature_to_plot, ... )
run_order |
(character) The sample-meta column name containing run order. |
qc_label |
(character) The label used to identify QC samples. |
qc_column |
(character) The sample-meta column name containing the labels used to identify QC samples. |
colour_by |
(character) The sample-meta column name to used to colour the plot. |
feature_to_plot |
(numeric, character, integer) The name or column id of the plotted feature. |
... |
Additional slots and values passed to |
A feature_profile
object.
D = MTBLS79_DatasetExperiment() C = feature_profile(run_order='sample_order', qc_label='QC', qc_column='class', colour_by='class', feature_to_plot=1) chart_plot(C,D)