splatPopeQTLEffects {splatter} | R Documentation |
Randomly pairs N genes (eGene) a SNP (eSNP) within the window size (eqtl.dist) and assigns each pair an effect size sampled from a gamma distribution parameterized using the effect sizes from a real eQTL study.
splatPopeQTLEffects(params, key, vcf)
params |
SplatPopParams object containing parameters for population
scale simulations. See |
key |
Partial splatPop key data.frame. |
vcf |
VariantAnnotation object containing genotypes of samples. |
The key updated with assigned eQTL effects.