slingParams {slingshot} | R Documentation |
Extracts additional control parameters used by Slingshot in lineage inference and fitting simultaneous principal curves.
slingParams(x) ## S4 method for signature 'SlingshotDataSet' slingParams(x) ## S4 method for signature 'SingleCellExperiment' slingParams(x)
x |
an object containing |
the list of additional parameters used by Slingshot.
SlingshotDataSet
: returns the list of additional parameters used
by Slingshot from a SlingshotDataSet
object.
SingleCellExperiment
: returns the list of additional parameters used
by Slingshot from a SingleCellExperiment
object.
data("slingshotExample") rd <- slingshotExample$rd cl <- slingshotExample$cl sds <- slingshot(rd, cl, start.clus = '5') slingParams(sds)