convertSCEToSeurat {singleCellTK} | R Documentation |
convertSCEToSeurat Converts sce object to seurat while retaining all assays and metadata
convertSCEToSeurat( inSCE, countsAssay = NULL, normAssay = NULL, scaledAssay = NULL )
inSCE |
A |
countsAssay |
Which assay to use from sce object for raw counts. Default |
normAssay |
Which assay to use from sce object for normalized data. Default |
scaledAssay |
Which assay to use from sce object for scaled data. Default |
Updated seurat object that contains all data from the input sce object
data(scExample, package = "singleCellTK") seurat <- convertSCEToSeurat(sce)