scater_logNormCounts {singleCellTK} | R Documentation |
scater_logNormCounts Uses logNormCounts to log normalize input data
scater_logNormCounts( inSCE, logAssayName = "ScaterLogNormCounts", useAssay = "counts" )
inSCE |
Input SingleCellExperiment object |
logAssayName |
New assay name for log normalized data |
useAssay |
Input assay |
inSCE Updated SingleCellExperiment object that contains the new log normalized data
Irzam Sarfraz
data(sce_chcl, package = "scds") sce_chcl <- scater_logNormCounts(sce_chcl,"logcounts", "counts")