similaRpeak-package {similaRpeak}R Documentation

similaRpeak: Metrics to estimate a level of similarity between two ChIP-Seq profiles

Description

This package is calculating six differents metrics to estimate a level of similarity between two ChIP-Seq profiles.

Details

The similarity function calculates six differents metrics:

The function similarity also reports basic information about each ChIP profile such as the number of positions, the area, the maximum value and the position of the maximum value.

To learn more about similaRpeak package see: https://github.com/adeschen/similaRpeak/wiki

Author(s)

Astrid Deschenes, Elsa Bernatchez, Charles Joly Beauparlant, Fabien Claude Lamaze, Rawane Samb, Pascal Belleau and Arnaud Droit

Maintainer: Astrid Deschenes <adeschen@hotmail.com>

See Also


[Package similaRpeak version 1.22.0 Index]