cellNtestPlot {signatureSearch} | R Documentation |
Bar plot of number of perturbations/compounds tested in cell types where cell types are grouped by 'primary site'.
cellNtestPlot(refdb)
refdb |
character(1), one of "lincs", "lincs_expr", "cmap" or "cmap_expr"
when using the pre-generated CMAP/LINCS databases or path to the HDF5 file
generated with the |
Faceted bar plot
refdb <- system.file("extdata", "sample_db.h5", package="signatureSearch") cellNtestPlot(refdb)