detectionPnegEcdf {sesame}R Documentation

Detection P-value based on ECDF of negative control

Description

The function takes a SigSet as input, computes detection p-value using negative control probes' empirical distribution and returns a new SigSet with an updated pval slot.

Usage

detectionPnegEcdf(sset, force = FALSE)

Arguments

sset

a SigSet

force

force rerun even if result already exists

Value

detection p-value

Examples

sset <- makeExampleSeSAMeDataSet()
sset <- detectionPnegEcdf(sset)

[Package sesame version 1.8.10 Index]