meanIntensity {sesame} | R Documentation |
The function takes one single SigSet
and computes mean
intensity of all the in-band measurements. This includes all Type-I
in-band measurements and all Type-II probe measurements. Both methylated
and unmethylated alleles are considered. This function outputs a single
numeric for the mean.
meanIntensity(sset, mask.use.manifest = TRUE)
sset |
a |
mask.use.manifest |
use mask column in the manifest to filter probes attributes set in extra(sset) |
mean of all intensities
sset <- makeExampleSeSAMeDataSet() meanIntensity(sset)