chromosomeCoverage {scmeth}R Documentation

CpG covergae in each chromosome

Description

Provides Coverage metrics for each sample by the chromosome

Usage

chromosomeCoverage(bs)

Arguments

bs

bsseq object

Value

matrix of chromsome covergae with column and rows indicating the samples and the chromosome respectively

Examples

directory <- system.file("extdata/bismark_data",package='scmeth')
bs <- HDF5Array::loadHDF5SummarizedExperiment(directory)
chromosomeCoverage(bs)

[Package scmeth version 1.10.0 Index]