stripBarcode {scRepertoire}R Documentation

Removing any additional prefixes to the barcodes of filtered contigs.

Description

Removing any additional prefixes to the barcodes of filtered contigs.

Usage

stripBarcode(contigs, column = 1, connector = "_", num_connects = 3)

Arguments

contigs

The raw loaded filtered_contig_annotation.csv

column

The column in which the barcodes are listed

connector

The type of character in which is attaching the defualt barcode with any other characters

num_connects

The number of strings combined with the connectors

Value

list with the suffixes of the barcodes removed.

Examples

stripBarcode(contig_list[[1]], column = 1, connector = "_", num_connects = 1)

[Package scRepertoire version 1.0.0 Index]