sracipeCircuit {sRACIPE} | R Documentation |
The circuit file should contain three columns with headers, "Source" "Target" "Type" Here "Source" and "Target" are the names of the genes and "Type" refers to the regulation, "1" if source activates target and "2" if source inhibits target.
sracipeCircuit(.object) ## S4 method for signature 'RacipeSE' sracipeCircuit(.object)
.object |
RacipeSE object |
A dataframe
rs <- RacipeSE() data("demoCircuit") sracipeCircuit(rs) <- demoCircuit circuitDataFrame <- sracipeCircuit(rs) rm(rs, demoCircuit,circuitDataFrame)