buildDGEList {rnaSeqMap} | R Documentation |
Creates DGEList
from the data in the database using the list
of genes supplied - for further analysis with edgeR
buildDGEList(genes,exps,conds=NULL)
genes |
vector of Ensembl gene IDs |
exps |
vector of experiments |
conds |
Vector of experimental condition descriptions for the samples |
DGEList
object filled with the data of gene-level counts of reads
Michal Okoniewski, Anna Lesniewska
buildDESeq
# if (xmapConnected()) # { # data(sample_data_rnaSeqMap) # gg <- names(rs.list) # cds <- buildDGEList(gg,1:6, c("a","b","b","a","a","b")) # }