fiveCol2GRanges {rnaSeqMap}R Documentation

fiveCol2GRanges

Description

Set of functions to operate on NucleotideDistr objects.

averageND calculates the mean for samples, sumND adds up selected samples' distributions, combineND adds two objects with the same size of distribution matrix, log2ND transforms all numeric data in the object into log space.

Usage

fiveCol2GRanges(t)

Arguments

t

A matrix or data frame including genomic regions in 5 columns: ID, chr/contig name, start, end, strand

Value

GenomicRanges object with the same values

Author(s)

Michal Okoniewski


[Package rnaSeqMap version 2.48.0 Index]