readsLenToKeep {ribosomeProfilingQC} | R Documentation |
Set the percentage to filter the reads.
readsLenToKeep(readsLengthDensity, cutoff = 0.8)
readsLengthDensity |
Output of summaryReadsLength |
cutoff |
Cutoff value. |
Reads length to be kept.
reads <- GRanges("chr1", ranges=IRanges(seq.int(100), width=1), qwidth=sample(25:31, size = 100, replace = TRUE, prob = c(.01, .01, .05, .1, .77, .05, .01))) readsLenToKeep(summaryReadsLength(reads, plot=FALSE))