PWidentallprotssub {pwOmics}R Documentation

Internal subfunction for all protein pathway identification.

Description

Internal subfunction for all protein pathway identification.

Usage

PWidentallprotssub(data_omics, genelists, genelist_ind, datab)

Arguments

data_omics

OmicsData object.

genelists

lists of genelists from chosen pathway databases

genelist_ind

integer specifying pathway database genelist matching; 1 = biocarta, 2 = kegg, 3 = nci, 4 = reactome.

datab

character vector indicating database name for message.

Value

OmicsData object with identified pathways for each protein.


[Package pwOmics version 1.22.0 Index]