makeFeatureGRanges {oligoClasses} | R Documentation |
Construct a GRanges object from several possible feature-level
classes. The conversion is useful for subsequent ranged-data queries,
such as findOverlaps
, countOverlaps
, etc.
makeFeatureGRanges(object, ...)
object |
A |
... |
See the |
A GRanges
object.
R. Scharpf
findOverlaps
, GRanges
, GenomeAnnotatedDataFrame
library(oligoClasses) library(GenomicRanges) library(Biobase) library(foreach) registerDoSEQ() data(oligoSetExample, package="oligoClasses") oligoSet <- oligoSet[chromosome(oligoSet) == 1, ] makeFeatureGRanges(oligoSet)