nucleosome_htseq {nucleR} | R Documentation |
Few reads from paired-ended MNase-seq experiment in S.cerevisiae where mononucleosomes were sequenced
GRanges
with the range of the reads and a data column with the
strand information.
This data is obtained from MNase digested nucleosomal DNA and sequenced with
Illumina platform. Paired-ended reads where mapped to SacCer1 genome using
Bowtie, and imported to R using the package ShortRead
and paired ends
where merged into a single range.
Reads were sorted by chromosome and starting position and only a few reads from the starting positions of chromosome 1 are presented.
Publication pending