motifValid {motifcounter}R Documentation

Check valididity of PFM

Description

This function checks if the PFM is valid. The function throws an error if the R matrix does not represent a PFM.

Usage

motifValid(pfm)

Arguments

pfm

An R matrix that represents a position frequency matrix

Value

None

Examples


# Load motif
motiffile = system.file("extdata", "x1.tab", package = "motifcounter")
motif = t(as.matrix(read.table(motiffile)))

# Check validity
motifcounter:::motifValid(motif)


[Package motifcounter version 1.14.0 Index]