detectGenes {monocle} | R Documentation |
Sets the global expression detection threshold to be used with this CellDataSet. Counts how many cells each feature in a CellDataSet object that are detectably expressed above a minimum threshold. Also counts the number of genes above this threshold are detectable in each cell.
detectGenes(cds, min_expr = NULL)
cds |
the CellDataSet upon which to perform this operation |
min_expr |
the expression threshold |
an updated CellDataSet object
## Not run: HSMM <- detectGenes(HSMM, min_expr=0.1) ## End(Not run)