check.contrast.format {metaseqR}R Documentation

Contrast validator

Description

Checks if the contrast vector follows the specified format. Internal use only.

Usage

    check.contrast.format(cnt, sample.list)

Arguments

cnt

contrasts vector.

sample.list

the input sample list.

Author(s)

Panagiotis Moulos

Examples

sample.list <- list(A=c("A1","A2"),B=c("B1","B2","B3"))
cnt <- c("A_vs_B") # Will work
#cnt <- c("A_vs_C") ## Will throw error!
check.contrast.format(cnt,sample.list)

[Package metaseqR version 1.30.0 Index]