make_mgdb_sqlite {metagenomeFeatures}R Documentation

make_mgdb_sqlite

Description

make_mgdb_sqlite

Usage

make_mgdb_sqlite(db_name, db_file, taxa_tbl, seqs)

Arguments

db_name

reference database name

db_file

file path for sqlite database

taxa_tbl

data frame with database taxonomy data

seqs

database sequences, path to fasta file or DNAStringSet object

Value

writes SQLite file

Examples

## Not run: 
make_mgdb_sqlite(db_name = "greengenes13.8_85",
    db_file = db_file,
    taxa_tbl = taxa_tbl,
    seqs = seqs)

## End(Not run)

[Package metagenomeFeatures version 2.10.0 Index]