compute_gene_score {mdp}R Documentation

Compute gene score Computes gene scores for each gene within each class and perturbation freq

Description

Compute gene score Computes gene scores for each gene within each class and perturbation freq

Usage

compute_gene_score(zscore, pdata, control_lab,
  score_type = c("gene_score", "gene_freq"))

Arguments

zscore

zscore data frame

pdata

phenotypic data with Class and Sample columns

control_lab

character specifying control class

score_type

set to 'gene_score' or 'gene_freq' to compute gene scores or frequencies

Value

data frame of gene scores or gene frequencies


[Package mdp version 1.10.0 Index]